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Class: NMRSpectrum

Chemical shift data obtained via nuclear magnetic resonance (NMR) spectroscopy.

URI: NMR:1002007

classDiagram class NMRSpectrum click NMRSpectrum href "../NMRSpectrum/" AnalysisSourceData <|-- NMRSpectrum click AnalysisSourceData href "../AnalysisSourceData/" NMRSpectrum : description NMRSpectrum : has_part NMRSpectrum --> "*" Entity : has_part click Entity href "../Entity/" NMRSpectrum : has_qualitative_attribute NMRSpectrum --> "* _recommended_" QualitativeAttribute : has_qualitative_attribute click QualitativeAttribute href "../QualitativeAttribute/" NMRSpectrum : has_quantitative_attribute NMRSpectrum --> "* _recommended_" QuantitativeAttribute : has_quantitative_attribute click QuantitativeAttribute href "../QuantitativeAttribute/" NMRSpectrum : id NMRSpectrum : other_identifier NMRSpectrum --> "*" Identifier : other_identifier click Identifier href "../Identifier/" NMRSpectrum : part_of NMRSpectrum --> "*" Entity : part_of click Entity href "../Entity/" NMRSpectrum : rdf_type NMRSpectrum --> "0..1 _recommended_" DefinedTerm : rdf_type click DefinedTerm href "../DefinedTerm/" NMRSpectrum : title NMRSpectrum : type NMRSpectrum --> "0..1" DefinedTerm : type click DefinedTerm href "../DefinedTerm/" NMRSpectrum : was_generated_by NMRSpectrum --> "*" NMRSpectroscopy : was_generated_by click NMRSpectroscopy href "../NMRSpectroscopy/"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
was_generated_by *
NMRSpectroscopy		 The slot to specify the NMRSpectroscopy that generated the NMRSpectrum EvaluatedEntity
title 0..1
String		 The slot to provide a title for the EvaluatedEntity Entity
description 0..1
String		 The slot to provide a description for the EvaluatedEntity Entity
id 1
Uriorcurie		 A slot to provide an URI for an entity within this schema Entity
other_identifier *
Identifier		 A slot to provide a secondary identifier of the EvaluatedEntity Entity
has_qualitative_attribute * recommended
QualitativeAttribute		 The slot to relate a qualitative attribute to an EvaluatedEntity, EvaluatedAc... Entity
has_quantitative_attribute * recommended
QuantitativeAttribute		 The slot to relate a quantitative attribute to an EvaluatedEntity, EvaluatedA... Entity
has_part *
Entity		 A slot to provide a part of the Entity Entity
part_of *
Entity		 The slot to specify an Entity of which the Entity is a part Entity
type 0..1
DefinedTerm		 This slot is described in more detail within the class in which it is used ClassifierMixin
rdf_type 0..1 recommended
DefinedTerm		 The slot to specify the ontology class that is instantiated by an entity ClassifierMixin

Usages

used by used in type used
NMRSpectralAnalysis evaluated_entity range NMRSpectrum

Comments

  • This class serves as an example for the way in which we want to build domain specific application profiles that are based on this DCAT-AP extension. It will thus be outsourced to a more appropriate location in the future.

Identifier and Mapping Information

Schema Source

  • from schema: https://NFDI4Chem.github.io/nmr-dcat-ap/nmr_dcat_ap.yaml

Mappings

Mapping Type Mapped Value
self NMR:1002007
native nmr_dcat_ap:NMRSpectrum

LinkML Source

Direct

name: NMRSpectrum
description: Chemical shift data obtained via nuclear magnetic resonance (NMR) spectroscopy.
comments:
- This class serves as an example for the way in which we want to build domain specific
  application profiles that are based on this DCAT-AP extension. It will thus be outsourced
  to a more appropriate location in the future.
from_schema: https://NFDI4Chem.github.io/nmr-dcat-ap/nmr_dcat_ap.yaml
is_a: AnalysisSourceData
slot_usage:
  was_generated_by:
    name: was_generated_by
    description: The slot to specify the NMRSpectroscopy that generated the NMRSpectrum.
    slot_uri: OBI:0000312
    range: NMRSpectroscopy
    multivalued: true
    inlined_as_list: true
class_uri: NMR:1002007

Induced

name: NMRSpectrum
description: Chemical shift data obtained via nuclear magnetic resonance (NMR) spectroscopy.
comments:
- This class serves as an example for the way in which we want to build domain specific
  application profiles that are based on this DCAT-AP extension. It will thus be outsourced
  to a more appropriate location in the future.
from_schema: https://NFDI4Chem.github.io/nmr-dcat-ap/nmr_dcat_ap.yaml
is_a: AnalysisSourceData
slot_usage:
  was_generated_by:
    name: was_generated_by
    description: The slot to specify the NMRSpectroscopy that generated the NMRSpectrum.
    slot_uri: OBI:0000312
    range: NMRSpectroscopy
    multivalued: true
    inlined_as_list: true
attributes:
  was_generated_by:
    name: was_generated_by
    description: The slot to specify the NMRSpectroscopy that generated the NMRSpectrum.
    from_schema: https://NFDI4Chem.github.io/nmr-dcat-ap/nmr_dcat_ap.yaml
    rank: 1000
    slot_uri: OBI:0000312
    alias: was_generated_by
    owner: NMRSpectrum
    domain_of:
    - Dataset
    - EvaluatedEntity
    range: NMRSpectroscopy
    multivalued: true
    inlined_as_list: true
  title:
    name: title
    description: The slot to provide a title for the EvaluatedEntity.
    from_schema: https://NFDI4Chem.github.io/nmr-dcat-ap/nmr_dcat_ap.yaml
    rank: 1000
    slot_uri: dcterms:title
    alias: title
    owner: NMRSpectrum
    domain_of:
    - Activity
    - AgenticEntity
    - Any
    - Attribution
    - Catalogue
    - CatalogueRecord
    - ChecksumAlgorithm
    - Concept
    - ConceptScheme
    - DataService
    - Dataset
    - DatasetSeries
    - DefinedTerm
    - Distribution
    - Document
    - Entity
    - Frequency
    - Geometry
    - Identifier
    - LegalResource
    - LicenseDocument
    - LinguisticSystem
    - MediaType
    - MediaTypeOrExtent
    - PeriodOfTime
    - Plan
    - Policy
    - ProvenanceStatement
    - QualitativeAttribute
    - QuantitativeAttribute
    - Resource
    - RightsStatement
    - Role
    - Standard
    - SupportiveEntity
    - Surrounding
    - TimeInstant
    range: string
  description:
    name: description
    description: The slot to provide a description for the EvaluatedEntity.
    from_schema: https://NFDI4Chem.github.io/nmr-dcat-ap/nmr_dcat_ap.yaml
    rank: 1000
    slot_uri: dcterms:description
    alias: description
    owner: NMRSpectrum
    domain_of:
    - Activity
    - AgenticEntity
    - Any
    - Attribution
    - Catalogue
    - CatalogueRecord
    - ChecksumAlgorithm
    - Concept
    - ConceptScheme
    - DataService
    - Dataset
    - DatasetSeries
    - Distribution
    - Document
    - Entity
    - Frequency
    - Geometry
    - Identifier
    - LegalResource
    - LicenseDocument
    - LinguisticSystem
    - MediaType
    - MediaTypeOrExtent
    - PeriodOfTime
    - Plan
    - Policy
    - ProvenanceStatement
    - QualitativeAttribute
    - QuantitativeAttribute
    - Resource
    - RightsStatement
    - Role
    - Standard
    - SupportiveEntity
    - Surrounding
    - TimeInstant
    range: string
  id:
    name: id
    description: A slot to provide an URI for an entity within this schema.
    in_subset:
    - domain_agnostic_core
    from_schema: https://NFDI4Chem.github.io/nmr-dcat-ap/nmr_dcat_ap.yaml
    rank: 1000
    identifier: true
    alias: id
    owner: NMRSpectrum
    domain_of:
    - Activity
    - AgenticEntity
    - Dataset
    - DefinedTerm
    - Document
    - Entity
    - LegalResource
    - LicenseDocument
    - Resource
    range: uriorcurie
    required: true
  other_identifier:
    name: other_identifier
    description: A slot to provide a secondary identifier of the EvaluatedEntity.
    from_schema: https://NFDI4Chem.github.io/nmr-dcat-ap/nmr_dcat_ap.yaml
    rank: 1000
    slot_uri: adms:identifier
    alias: other_identifier
    owner: NMRSpectrum
    domain_of:
    - Activity
    - AgenticEntity
    - Dataset
    - Entity
    range: Identifier
    required: false
    multivalued: true
    inlined_as_list: true
  has_qualitative_attribute:
    name: has_qualitative_attribute
    description: The slot to relate a qualitative attribute to an EvaluatedEntity,
      EvaluatedActivity or AgenticEntity
    in_subset:
    - domain_agnostic_core
    from_schema: https://NFDI4Chem.github.io/nmr-dcat-ap/nmr_dcat_ap.yaml
    rank: 1000
    slot_uri: dcterms:relation
    alias: has_qualitative_attribute
    owner: NMRSpectrum
    domain_of:
    - Activity
    - AgenticEntity
    - Entity
    range: QualitativeAttribute
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  has_quantitative_attribute:
    name: has_quantitative_attribute
    description: The slot to relate a quantitative attribute to an EvaluatedEntity,
      EvaluatedActivity or AgenticEntity
    in_subset:
    - domain_agnostic_core
    from_schema: https://NFDI4Chem.github.io/nmr-dcat-ap/nmr_dcat_ap.yaml
    rank: 1000
    slot_uri: dcterms:relation
    alias: has_quantitative_attribute
    owner: NMRSpectrum
    domain_of:
    - Activity
    - AgenticEntity
    - Entity
    range: QuantitativeAttribute
    recommended: true
    multivalued: true
    inlined: true
    inlined_as_list: true
  has_part:
    name: has_part
    description: A slot to provide a part of the Entity.
    from_schema: https://NFDI4Chem.github.io/nmr-dcat-ap/nmr_dcat_ap.yaml
    rank: 1000
    slot_uri: dcterms:hasPart
    alias: has_part
    owner: NMRSpectrum
    domain_of:
    - Activity
    - AgenticEntity
    - Catalogue
    - Entity
    range: Entity
    multivalued: true
    inlined_as_list: true
  part_of:
    name: part_of
    description: The slot to specify an Entity of which the Entity is a part.
    notes:
    - not in DCAT-AP
    in_subset:
    - domain_agnostic_core
    from_schema: https://NFDI4Chem.github.io/nmr-dcat-ap/nmr_dcat_ap.yaml
    rank: 1000
    slot_uri: dcterms:isPartOf
    alias: part_of
    owner: NMRSpectrum
    domain_of:
    - Activity
    - AgenticEntity
    - Entity
    inverse: has_part
    range: Entity
    multivalued: true
    inlined_as_list: true
  type:
    name: type
    description: This slot is described in more detail within the class in which it
      is used.
    from_schema: https://NFDI4Chem.github.io/nmr-dcat-ap/nmr_dcat_ap.yaml
    rank: 1000
    slot_uri: dcterms:type
    alias: type
    owner: NMRSpectrum
    domain_of:
    - Agent
    - ClassifierMixin
    - Dataset
    - LicenseDocument
    range: DefinedTerm
    inlined: true
  rdf_type:
    name: rdf_type
    description: The slot to specify the ontology class that is instantiated by an
      entity.
    in_subset:
    - domain_agnostic_core
    from_schema: https://NFDI4Chem.github.io/nmr-dcat-ap/nmr_dcat_ap.yaml
    rank: 1000
    slot_uri: rdf:type
    alias: rdf_type
    owner: NMRSpectrum
    domain_of:
    - ClassifierMixin
    range: DefinedTerm
    recommended: true
    inlined: true
class_uri: NMR:1002007